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1

Restoring Fertility with Human Induced Pluripotent Stem Cells: Are We There Yet?

Gell, Joanna J., Clark, Amander T.

Journal:

Year:

2018

Language:

english

File:

PDF, 429 KB

english, 2018

2

Turning back the clock and revolutionizing a science. The 2012 Nobel Prize in Physiology or Medicine goes to Developmental Biology. John Bertrand Gurdon, Nobel Laureate

Clark, Amander, Coleman, John R., Prather, Randall S.

Journal:

Molecular Reproduction and Development

Year:

2012

Language:

english

File:

PDF, 92 KB

english, 2012

3

Nuclear Localization of Mitochondrial TCA Cycle Enzymes as a Critical Step in Mammalian Zygotic Genome Activation

Nagaraj, Raghavendra, Sharpley, Mark S., Chi, Fangtao, Braas, Daniel, Zhou, Yonggang, Kim, Rachel, Clark, Amander T., Banerjee, Utpal

Journal:

Year:

2017

Language:

english

File:

PDF, 8.40 MB

english, 2017

4

Mitochondrial Function Controls Proliferation and Early Differentiation Potential of Embryonic Stem Cells

Sudip Mandal, Anne G. Lindgren, Anand S. Srivastava, Amander T. Clark, Utpal Banerjee

Journal:

Year:

2011

Language:

english

File:

PDF, 4.17 MB

english, 2011

5

DNA Demethylation Dynamics in the Human Prenatal Germline

Gkountela, Sofia, Zhang, Kelvin X., Shafiq, Tiasha A., Liao, Wen-Wei, Hargan-Calvopiña, Joseph, Chen, Pao-Yang, Clark, Amander T.

Journal:

Year:

2015

Language:

english

File:

PDF, 4.33 MB

english, 2015

6

Human embryonic stem cell genes OCT4, NANOG, STELLAR, and GDF3 are expressed in both seminoma and breast carcinoma

Uche I. Ezeh, Paul J. Turek, Renee A. Reijo, Amander T. Clark

Journal:

Year:

2005

Language:

english

File:

PDF, 856 KB

english, 2005

7

In vitro studies on the roles of transforming growth factor-beta1 in rat metanephric development

Clark, Amander T., Young, Richard J., Bertram, John F.

Journal:

Kidney International

Year:

2001

Language:

english

File:

PDF, 12.12 MB

english, 2001

8

Directed Differentiation of Human-Induced Pluripotent Stem Cells Generates Active Motor Neurons

Saravanan Karumbayaram, Bennett G. Novitch, Michaela Patterson, Joy A. Umbach, Laura Richter, Anne Lindgren, Anne E. Conway, Amander T. Clark, Steve A. Goldman, Kathrin Plath, Martina Wiedau-pazos, Ha

Journal:

Year:

2009

Language:

english

File:

PDF, 3.49 MB

english, 2009

9

Human Embryonic Stem Cells as Models for Aneuploid Chromosomal Syndromes

Juan-Carlos Biancotti, Kavita Narwani, Nicole Buehler, Berhan Mandefro, Tamar Golan-Lev, Ofra Yanuka, Amander Clark, David Hill, Nissim Benvenisty, Neta Lavon

Journal:

Year:

2010

Language:

english

File:

PDF, 1.18 MB

english, 2010

10

Implementing Large-Scale ENU Mutagenesis Screens in North America

Amander T. Clark, Daniel Goldowitz, Joseph S. Takahashi, Martha Hotz Vitaterna, Sandra M. Siepka, Luanne L. Peters, Wayne N. Frankel, George A. Carlson, Janet Rossant, Joseph H. Nadeau, Monica J. Just

Journal:

Year:

2004

Language:

english

File:

PDF, 213 KB

english, 2004

11

The Stem Cell Identity of Testicular Cancer

Amander T. Clark

Journal:

Stem Cell Reviews and Reports

Year:

2007

Language:

english

File:

PDF, 280 KB

english, 2007

12

Expression of transforming growth factor-β type II receptor mRNA in embryonic and adult rat kidney

Amander T CLARK, Miriam D FORD, Victor NURCOMBE, Daine ALCORN, Brian KEY, Adam C PUCHE, John F BERTRAM

Journal:

Year:

1995

Language:

english

File:

PDF, 1.88 MB

english, 1995

13

Copy Number Variant Analysis of Human Embryonic Stem Cells

Hao Wu, Kevin J. Kim, Kshama Mehta, Salvatore Paxia, Andrew Sundstrom, Thomas Anantharaman, Ali I. Kuraishy, Tri Doan, Jayati Ghosh, April D. Pyle, Amander Clark, William Lowry, Guoping Fan, Tim Baxte

Journal:

Year:

2008

Language:

english

File:

PDF, 250 KB

english, 2008

14

Human STELLAR, NANOG, and GDF3 Genes Are Expressed in Pluripotent Cells and Map to Chromosome 12p13, a Hotspot for Teratocarcinoma

Amander T. Clark, Ryan T. Rodriguez, Megan S. Bodnar, Michael J. Abeyta, Marcelle I. Cedars, Paul J. Turek, Meri T. Firpo, Renee A. Reijo Pera

Journal:

Year:

2004

Language:

english

File:

PDF, 365 KB

english, 2004

15

Histone H3 Lysine 56 Acetylation Is Linked to the Core Transcriptional Network in Human Embryonic Stem Cells

Wei Xie, Chunying Song, Nicolas L. Young, Adam S. Sperling, Feng Xu, Rupa Sridharan, Anne E. Conway, Benjamin A. Garcia, Kathrin Plath, Amander T. Clark, Michael Grunstein

Journal:

Year:

2009

Language:

english

File:

PDF, 1.03 MB

english, 2009

16

Female Human iPSCs Retain an Inactive X Chromosome

Jason Tchieu, Edward Kuoy, Mark H. Chin, Hung Trinh, Michaela Patterson, Sean P. Sherman, Otaren Aimiuwu, Anne Lindgren, Shahrad Hakimian, Jerome A. Zack, Amander T. Clark, April D. Pyle, William E. L

Journal:

Year:

2010

Language:

english

File:

PDF, 3.22 MB

english, 2010

17

Identification and Classification of Chromosomal Aberrations in Human Induced Pluripotent Stem Cells

Yoav Mayshar, Uri Ben-David, Neta Lavon, Juan-Carlos Biancotti, Benjamin Yakir, Amander T. Clark, Kathrin Plath, William E. Lowry, Nissim Benvenisty

Journal:

Year:

2010

Language:

english

File:

PDF, 1.22 MB

english, 2010

18

Pluripotency Takes Off without Blimp1

Amander T. Clark

Journal:

Year:

2012

Language:

english

File:

PDF, 173 KB

english, 2012

19

Intermolecular interactions of homologs of germ plasm components in mammalian germ cells

Mark S. Fox, Amander T. Clark, Mohammed El Majdoubi, Jean-Louis Vigne, Jun Urano, Chris E. Hostetler, Michael D. Griswold, Richard I. Weiner, Renee A. Reijo Pera

Journal:

Developmental Biology

Year:

2007

Language:

english

File:

PDF, 1.98 MB

english, 2007

20

Nkx2-5 Pathways and Congenital Heart Disease: Loss of Ventricular Myocyte Lineage Specification Leads to Progressive Cardiomyopathy and Complete Heart Block

Mohammad Pashmforoush, Jonathan T Lu, Hanying Chen, Tara St Amand, Richard Kondo, Sylvain Pradervand, Sylvia M Evans, Bob Clark, James R Feramisco, Wayne Giles, Siew Yen Ho, D.Woodrow Benson, Michael

Journal:

Year:

2004

Language:

english

File:

PDF, 4.20 MB

english, 2004

21

The ontogeny of cKIT+ human primordial germ cells proves to be a resource for human germ line reprogramming, imprint erasure and in vitro differentiation

Gkountela, Sofia, Li, Ziwei, Vincent, John J., Zhang, Kelvin X., Chen, Angela, Pellegrini, Matteo, Clark, Amander T.

Journal:

Nature Cell Biology

Year:

2012

Language:

english

File:

PDF, 3.54 MB

english, 2012

22

Functional genetic analysis of mouse chromosome 11

Kile, Benjamin T., Hentges, Kathryn E., Clark, Amander T., Nakamura, Hisashi, Salinger, Andrew P., Liu, Bin, Box, Neil, Stockton, David W., Johnson, Randy L., Behringer, Richard R., Bradley, Allan, Ju

Journal:

Year:

2003

Language:

english

File:

PDF, 403 KB

english, 2003

23

A Self-Renewal Program Controls the Expansion of Genetically Unstable Cancer Stem Cells in Pluripotent Stem Cell-Derived Tumors

Anne E. Conway, Anne Lindgren, Zoran Galic, April D. Pyle, Hong Wu, Jerome A. Zack, Matteo Pelligrini, Michael A. Teitell, Amander T. Clark

Journal:

Year:

2009

Language:

english

File:

PDF, 803 KB

english, 2009

24

Modeling human germ cell development with embryonic stem cells

Clark, Amander T, Reijo Pera, Renee A

Journal:

Regenerative Medicine

Year:

2006

Language:

english

File:

PDF, 645 KB

english, 2006

25

Microfluidic image cytometry for quantitative single-cell profiling of human pluripotent stem cells in chemically defined conditions

Kamei, Ken-ichiro, Ohashi, Minori, Gschweng, Eric, Ho, Quinn, Suh, Jane, Tang, Jinghua, For Yu, Zeta Tak, Clark, Amander T., Pyle, April D., Teitell, Michael A., Lee, Ki-Bum., Witte, Owen N., Tseng, H

Journal:

Year:

2010

Language:

english

File:

PDF, 436 KB

english, 2010

26

Germline stem cells: toward the regeneration of spermatogenesis

Valli, Hanna, Phillips, Bart T., Shetty, Gunapala, Byrne, James A., Clark, Amander T., Meistrich, Marvin L., Orwig, Kyle E.

Journal:

Fertility and Sterility

Year:

2014

Language:

english

File:

PDF, 1.36 MB

english, 2014

27

PRMT5 is Required for Human Embryonic Stem Cell Proliferation But Not Pluripotency

Gkountela, Sofia, Li, Ziwei, Chin, Chee Jia, Lee, Serena A., Clark, Amander T.

Journal:

Stem Cell Reviews and Reports

Year:

2014

Language:

english

File:

PDF, 682 KB

english, 2014

28

Generation and characterization of transgene-free human induced pluripotent stem cells and conversion to putative clinical-grade status

Awe, Jason P, Lee, Patrick C, Ramathal, Cyril, Vega-Crespo, Agustin, Durruthy-Durruthy, Jens, Cooper, Aaron, Karumbayaram, Saravanan, Lowry, William E, Clark, Amander T, Zack, Jerome A, Sebastiano, Vi

Journal:

Stem Cell Research & Therapy

Year:

2013

Language:

english

File:

PDF, 1.17 MB

english, 2013

29

A Big Surprise in the Little Zygote: The Curious Business of Losing Methylated Cytosines

Gkountela, Sofia, Clark, Amander T.

Journal:

Year:

2014

Language:

english

File:

PDF, 332 KB

english, 2014

30

Aneuploidy induces profound changes in gene expression, proliferation and tumorigenicity of human pluripotent stem cells

Ben-David, Uri, Arad, Gal, Weissbein, Uri, Mandefro, Berhan, Maimon, Adva, Golan-Lev, Tamar, Narwani, Kavita, Clark, Amander T., Andrews, Peter W., Benvenisty, Nissim, Carlos Biancotti, Juan

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 1.50 MB

english, 2014

31

Hatching human blastocyst

Kim, Rachel, Clark, Amander T.

Journal:

Molecular Reproduction and Development

Year:

2014

File:

PDF, 669 KB

2014

32

Bone Morphogenetic Proteins Induce Germ Cell Differentiation from Human Embryonic Stem Cells

Kee, Kehkooi, Gonsalves, Joanna M., Clark, Amander T., Pera, Renee A. Reijo

Journal:

Stem Cells and Development

Year:

2006

Language:

english

File:

PDF, 201 KB

english, 2006

33

Fruitful progress to fertility: Male fertility in the test tube

Clark, Amander T, Phillips, Bart T, Orwig, Kyle E

Journal:

Nature Medicine

Year:

2011

Language:

english

File:

PDF, 407 KB

english, 2011

34

Cdk2ap2 Is a Novel Regulator for Self-Renewal of Murine Embryonic Stem Cells

Deshpande, Amit M., Khalid, Omar, Kim, Jeffrey J., Kim, Yong, Lindgren, Anne, Clark, Amander T., Wong, David T.W.

Journal:

Stem Cells and Development

Year:

2012

Language:

english

File:

PDF, 1017 KB

english, 2012

35

The Aorta-Gonad-Mesonephros Organ Culture Recapitulates 5hmC Reorganization and Replication-Dependent and Independent Loss of DNA Methylation in the Germline

Calvopina, Joseph Hargan, Cook, Helene, Vincent, John J., Nee, Kevin, Clark, Amander T.

Journal:

Stem Cells and Development

Year:

2015

Language:

english

File:

PDF, 1.36 MB

english, 2015

36

Erratum: MORC1 represses transposable elements in the mouse male germline

Pastor, William A., Stroud, Hume, Nee, Kevin, Liu, Wanlu, Pezic, Dubravka, Manakov, Sergei, Lee, Serena A., Moissiard, Guillaume, Zamudio, Natasha, Bourc’his, Déborah, Aravin, Alexei A., Clark, Amande

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 317 KB

english, 2015

37

DNA methylation remodeling in vitro and in vivo

Clark, Amander T

Journal:

Current Opinion in Genetics & Development

Year:

2015

Language:

english

File:

PDF, 703 KB

english, 2015

38

MORC1 represses transposable elements in the mouse male germline

Pastor, William A., Stroud, Hume, Nee, Kevin, Liu, Wanlu, Pezic, Dubravka, Manakov, Sergei, Lee, Serena A., Moissiard, Guillaume, Zamudio, Natasha, Bourc’his, Déborah, Aravin, Alexei A., Clark, Amande

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 2.08 MB

english, 2014

39

PGC Reversion to Pluripotency Involves Erasure of DNA Methylation from Imprinting Control Centers followed by Locus-Specific Re-methylation

Oliveros-Etter, Marisabel, Li, Ziwei, Nee, Kevin, Hosohama, Linzi, Hargan-Calvopina, Joseph, Lee, Serena A., Joti, Prakash, Yu, Juehua, Clark, Amander T.

Journal:

Stem Cell Reports

Year:

2015

Language:

english

File:

PDF, 4.84 MB

english, 2015

40

Naive Human Pluripotent Cells Feature a Methylation Landscape Devoid of Blastocyst or Germline Memory

Pastor, William A., Chen, Di, Liu, Wanlu, Kim, Rachel, Sahakyan, Anna, Lukianchikov, Anastasia, Plath, Kathrin, Jacobsen, Steven E., Clark, Amander T.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.33 MB

english, 2016

41

Expression of Bone Morphogenetic Protein Receptors in the Developing Mouse Metanephros

Martinez, Gemma, Loveland, Kate L., Clark, Amander T., Dziadek, Marie, Bertram, John F.

Journal:

Nephron Experimental Nephrology

Year:

2001

Language:

english

File:

PDF, 584 KB

english, 2001

42

Editorial overview: Cell reprogramming, regeneration and repair: Reprogramming: the eternal circle

Clark, Amander T, Zwaka, Thomas P

Journal:

Current Opinion in Genetics & Development

Year:

2015

Language:

english

File:

PDF, 164 KB

english, 2015

43

Advances in renal development

Clark, Amander T., Bertram, John F.

Journal:

Current Opinion in Nephrology & Hypertension

Year:

2000

Language:

english

File:

PDF, 148 KB

english, 2000

44

Mouse MORC3 is a GHKL ATPase that localizes to H3K4me3 marked chromatin

Li, Sisi, Yen, Linda, Pastor, William A., Johnston, Jonathan B., Du, Jiamu, Shew, Colin J., Liu, Wanlu, Ho, Jamie, Stender, Bryan, Clark, Amander T., Burlingame, Alma L., Daxinger, Lucia, Patel, Dinsh

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.97 MB

english, 2016

45

Stage-Specific Demethylation in Primordial Germ Cells Safeguards against Precocious Differentiation

Hargan-Calvopina, Joseph, Taylor, Sara, Cook, Helene, Hu, Zhongxun, Lee, Serena A., Yen, Ming-Ren, Chiang, Yih-Shien, Chen, Pao-Yang, Clark, Amander T.

Journal:

Developmental Cell

Year:

2016

Language:

english

File:

PDF, 3.84 MB

english, 2016

46

An integration-free, virus-free rhesus macaque induced pluripotent stem cell line (riPSC89) from embryonic fibroblasts

Sosa, Enrique, Kim, Rachel, Rojas, Ernesto J., Hosohama, Linzi, Hennebold, Jon D., Orwig, Kyle E., Clark, Amander T.

Journal:

Stem Cell Research

Year:

2016

Language:

english

File:

PDF, 1.14 MB

english, 2016

47

Human Naive Pluripotent Stem Cells Model X Chromosome Dampening and X Inactivation

Sahakyan, Anna, Kim, Rachel, Chronis, Constantinos, Sabri, Shan, Bonora, Giancarlo, Theunissen, Thorold W., Kuoy, Edward, Langerman, Justin, Clark, Amander T., Jaenisch, Rudolf, Plath, Kathrin

Journal:

Year:

2017

Language:

english

File:

PDF, 5.54 MB

english, 2017

48

Multiparameter mechanical and morphometric screening of cells

Masaeli, Mahdokht, Gupta, Dewal, O’Byrne, Sean, Tse, Henry T. K., Gossett, Daniel R., Tseng, Peter, Utada, Andrew S., Jung, Hea-Jin, Young, Stephen, Clark, Amander T., Di Carlo, Dino

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 2.17 MB

english, 2016

49

An integration-free, virus-free rhesus macaque induced pluripotent stem cell line (riPSC90) from embryonic fibroblasts

Sosa, Enrique, Kim, Rachel, Rojas, Ernesto J., Hosohama, Linzi, Hennebold, Jon D., Orwig, Kyle E., Clark, Amander T.

Journal:

Stem Cell Research

Year:

2017

Language:

english

File:

PDF, 1.17 MB

english, 2017

50

Modeling human infertility with pluripotent stem cells

Chen, Di, Gell, Joanna J., Tao, Yu, Sosa, Enrique, Clark, Amander T.

Journal:

Stem Cell Research

Year:

2017

Language:

english

File:

PDF, 620 KB

english, 2017

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